Helicobacter Pylori Infection in Children: A Practical Update Based on European/North American Society of Pediatric Gastroenterology, Hepatology and Nutrition 2024 Guidelines

Sahoo JK and Agrawal A

Published on: 2025-10-01

Abstract

Helicobacter pylori infection, typically acquired in early childhood. Spontaneous eradication is rare. It is associated with peptic ulcer disease and gastric cancer. It is a marker of sanitation status transmitted by feco-oral route. Invasive testing via esophagogastroduodenoscopy with gastric biopsies is the investigation of choice for initial diagnosis. Treatment is warranted in the presence of H. pylori positive gastric or duodenal ulcers or erosions and may be considered if H. pylori is incidentally detected. Clarithromycin-antibiotic sensitivity testing-guided triple therapy is preferred, consisting of a protein pump inhibitor and two antibiotics for 10–14 days; if unavailable, bismuth-based quadruple therapy is advised. All treated patients should be monitored for eradication 6-8 weeks after therapy with non-invasive tests such as the urea (13-C) breath test or stool antigen tests.

Keywords

Helicobacter pylori; Children; Guidelines

Introduction

Helicobacter pylori (H. pylori) is a Gram-negative urease producing microaerophilic spiral bacterium first discovered in 1983. It has a strong affinity for the gastric mucosa and is associated with chronic active gastritis, peptic ulcer disease (PUD), and gastric adenocarcinoma. Infection is typically acquired in early childhood and persist throughout the life, as spontaneous eradication is rare [1,2]. H. pylori infects at least 50% of the world’s population [3]. Among those infected, approximately 10–15% may develop peptic ulcer disease, and 1–3% may progress to gastric adenocarcinoma. However, in children, the infection is often asymptomatic, and such complications are uncommon [4].

Transmission occurs primarily through direct person-to-person contact via oral–oral, fecal–oral, or gastric-oral routes. Children acquire infection mainly through the faecal–oral route as H. pylori has been cultured from the stool of infected children [5]. H. pylori is a marker of sanitation status, with declining prevalence in developed countries but prevalence remains high in developing countries ranging from 18.9-87.7%. In India it is estimated to be 63.5% [1]. The rising rates of antibiotic resistance globally is alarming and pose a challenge to effective management. This update highlights evolving recommendations for diagnosis and management of H. pylori infection in children based on the latest guidelines by the European/North American Society of Pediatric Gastroenterology, Hepatology, and Nutrition 2024.

Recommendations Of H. Pylori Testing In Children

H. pylori infection in children remains asymptomatic. Therefore, the primary goal of clinical investigations for evaluating gastrointestinal symptoms should be directed towards underlying causes rather than solely focussing on H. pylori as a causative agent. The esophagogastroduodenoscopy (EGD) with gastric biopsies remains the cornerstone of diagnosis. Non-invasive testing has no role in the initial evaluation. Treatment is clearly indicated if endoscopy detects H. pylori positive gastric or duodenal ulcers and/or erosions. If H. pylori is detected incidentally on biopsies (RUT, histopathology, culture, or molecular tests) without endoscopic lesions, treatment may be offered after discussing potential risks and benefits with caregivers. In children with refractory iron deficiency anemia, the guidelines recommend endoscopy-based H. pylori testing and treatment can be offered if infection is confirmed. A new recommendation in the 2024 guidelines is to consider non-invasive testing in asymptomatic children with a first-degree relative with gastric cancer.

When is H. pylori Testing Not Recommended?

The guidelines clearly advise against testing for H. pylori testing in the following situation such as children with disorder of gut–brain interaction, children undergoing endoscopy for other gastrointestinal condition (e.g., celiac, inflammatory bowel disease, and eosinophilic esophagitis), those with chronic immune thrombocytopenic purpura, and in short stature evaluation when other causes ruled out.

How to Test for H. pylori?

H. pylori testing can be done using either invasive methods (via esophagogastroduodenoscopy) or non-invasive tests (such as stool antigen test, urea breath test, and serology). The initial diagnosis of H. pylori should be made using invasive, gastric biopsy-based methods such as culture or molecular tests and histopathological evaluation as per the Sydney system. A minimum of 6 gastric biopsies (three from the corpus (body) and three from the antrum) should be taken and labelled by specific site for histopathological evaluation, culture or molecular tests, and rapid urease test (RUT). Care should be taken while taking biopsy, as active bleeding decreases the sensitivity of biopsy-based tests.

Symptom relief alone is not a reliable marker of eradication success. To ensure eradication, non-invasive test such as urea (13-C) breath test (13C-UBT), or a two-step monoclonal stool antigen test are preferred [6]. The guideline recommends using either of these two tests to ensure eradication of infection. The 13C-UBT has a negative predictive value of 99.2% and may give false positive result in children < 6 years due to lower distribution volume and different CO2 production rates [7]. Similarly, the monoclonal stool antigen test shows excellent sensitivity of 100% and sensitivity of 92.3% [8]. Among the non-invasive tests, serological assays are not recommended because they cannot distinguish between current and past infections [9].

Recommendations For Management

The potential benefit and risk of H. pylori eradication therapy should be clearly discussed with caregivers, particularly in cases with incidental finding of H. pylori-associated gastritis (including nodular gastritis) with other GI diseases. Potential benefits include the prevention of future gastric complications (peptic ulcer disease, atrophy/intestinal metaplasia, gastric MALT lymphoma, and gastric cancer), as well as reducing parental anxiety due to nontreatment. Risks such as increased antibiotic resistance, potential drug side effects, and disruption of gut microbiota, and the possibility of treatment failure/reinfection.

Global antibiotic resistance to H.pylori is rising, with metronidazole (MTZ) and clarithromycin (CLA) resistance rates reported to be 35.3% and 32.6% respectively [10]. Given this, eradication therapy should ideally be guided by CLA susceptibility testing (CLA-AST) to improve treatment success and reduce resistance. If CLA-AST is not available, CLA should not be used empirically. Metronidazole-AST is not routinely recommended, as there is a lack of reliable molecular diagnostic method for MET-AST and culture-methods are not promising. CLA-AST can be performed using culture-based methods or molecular methods such as PCR. PCR-based methods are preferable as they are more sensitive and rapid turnaround times.

Proton pump inhibitor (PPI) forms the cornerstone of management. The first line regimens include AST-guided triple therapy which consists of a high dosage of PPIs, a high dosage of amoxicillin (AMO) and either CLA or MTZ, based on susceptibility, for duration of 14 days. In patients with allergy to penicillin, alternative agents should be considered. Among PPIs, esomeprazole is preferred as it is less susceptible to degradation by rapid metabolizers with relevant cytochrome polymorphisms. In the absence of AST, bismuth-based quadruple therapy (bismuth, PPIs, AMO, MET) is recommended as the empirical first line regimen. When the strain is resistant to CLA and patient is allergic to penicillin, Bismuth based quadruple therapy with tetracycline (TET) is suggested (Tetracycline is reserved for children >8 years of age). (see figure 1) AST-guided triple therapy is suggested over sequential-quadruple therapy. Drug dosages based on body weight are summarized in Table 1.

Figure 1: CLA-AST Based Treatment Regimens for H. pylori Infection in Children.

Abbreviations: CLA: Clarithromycin, PPI: proton pump inhibitor, AMO: amoxicillin, MET: metronidazole, Children (>8years) TET can replace AMO; however, pediatric data is lacking, # Bismuth quadruple regimens are preferred due to higher eradication rates.

Table 1: Drug Doses According to Bodyweight.

 

15-24kg        

25-34kg         

35-49kg             

 >50kg 

Colloidal bismuth subcitrate

60mg TDS     

120mg BD    

120mg TDS      

180 mg/120 mg/120 mg

Proton pump inhibitor#

20mg BD

30mg BD      

40mg BD          

40mg BD

Amoxycillin

500mg TDS   

750mg TDS   

1gm TDS          

1gm TDS

Metronidazole

250mg BD     

500mg BD     

500mg BD       

750mg BD

Clarithromycin

250mg BD     

500mg BD     

500mg BD       

500mg BD

  # Esomeprazole preferred because unaffected by CYP2C19 polymorphisms.

Rescue Therapy

There is no recommendation regarding rescue therapy in a recent guideline; however, as per expert consensus, children who fail on initial therapy should be treated again with an alternative regimen. Cause for failure must be evaluated (non-compliance, inadequate dosing or treatment not tailored to CLA-AST). CLA or fluoroquinolones should be avoided, if the child has a prior history of using it. MET resistance can be overcome by using higher dosage of MET for a longer duration. If two consecutive regimens fail, then H. pylori susceptibility testing should be reconsidered. (figure 2).

Figure 2: Rescue Therapies.

Newer Drugs

Potassium-competitive acid blockers such as Vonoprazan have emerged as promising alternative to traditional PPIs. It has shown favorable outcomes in adult studies and is now approved for H. pylori eradication in Japan and the United States. However, pediatric data are currently lacking, and Vonoprazan is not yet approved for use in children [11].

Check for Eradication 

Testing for H. pylori eradication should be performed 6–8 weeks after completion of therapy. The current guidelines recommend use of non-invasive tests like 13 C-UBT or a two-step monoclonal stool antigen test (SAT) to confirm eradication. Follow-up endoscopy is not routinely indicated and is reserved for cases of complicated PUD.

Summary of Key New Additions in 2024 Guidelines

A detailed comparison of the 2011, 2016, and 2024 guidelines is shown in Table 1.

  • Elimination of pylori testing in chronic ITP (previously considered)
  • Introduction of non-invasive testing recommendation for children with a family history of gastric cancer
  • Clarification on testing/treatment if pylori is found incidentally during EGD for other GI conditions
  • Acceptance of molecular diagnostic methods for diagnosis and resistance testing
  • Bismuth-based quadruple therapy preferred in case of unknown susceptibility

Table 2: Comparison of the 2011, 2017 and 2024 Guidelines for Management of H. pylori Infection in Children and Adolescents.

 

2011 [12]

2016 [13]

2024 [6]

Testing for H. pylori

Goal of gastrointestinal symptoms evaluation

Identify cause of symptoms, not just H. pylori infection

Identify cause of symptoms, not just H. pylori infection

Identify cause of symptoms, not just H. pylori infection

Test and treat strategy

Not recommended

Not recommended

Not recommended

Who to test?

PUD and/or erosion

PUD and/or erosion

PUD and/or erosions

Functional abdominal pain

Not recommended

Not recommended

Not recommended

Testing for H. pylori infection while investigating other diseases such as IBD, CD or EoE

Not mentioned

Not mentioned

Not recommended

Incidental finding of H. pylori-associated gastritis with other GI diseases (IBD, CD, EoE)

Not mentioned

Treatment may be considered after discussing the risks and benefits

Treatment may be considered after discussing the risks and benefits

Refractory iron deficiency anemia

May be considered

May be considered

May be considered

Short stature

Not recommended

Not recommended

Not recommended

Chronic immune thrombocytopenic purpura

Not mentioned

Non-invasive tests may be considered

Both invasive and non-invasive tests are not recommended

Family history of gastric cancer

May be considered

Testing recommendation removed

Non-invasive test recommended

Screening for H. pylori in children belonging to racial/ethnic groups at increased risk for GC that are living in NA/Europe

Not mentioned

Not mentioned

Not recommended

Diagnosis

Gastric biopsy based

Either a positive histopathology plus, positive RUT Or positive culture

Either a positive histopathology plus, at least one other positive biopsy-based test such as RUT, or molecular-based assays (PCR or FISH) or positive culture

Positive histopathology according to Sydney system and positive culture or molecular tests

How many biopsies

Multiple biopsies from antrum and corpus

Minimum 6 biopsies (2 antrum and 2 corpus for histopathology, one biopsy from the antrum and one biopsy from the corpus for culture and molecular tests or other tests, that is, RUT

Minimum 6 biopsies (2 antrum and 2 corpus for histopathology, one biopsy from the antrum and one biopsy from the corpus for culture and molecular tests or other tests, that is, RUT

Molecular methods (RT-PCR)

After treatment failure. FISH for CLA on paraffin slides of first biopsies

More emphasis on culture for resistance testing

Molecular methods now considered acceptable for both diagnosis and resistance testing (especially clarithromycin)

Precaution before invasive testing

Off PPI x 2 weeks Off antibiotics x 4weeks

Off PPI x 2 weeks Off antibiotics x 4weeks

Off PPI x 2 weeks Off antibiotics x 4weeks

Serology

Not recommended

Not recommended

Not recommended

Use of stool for molecular tests or culture for H. pylori infection detection or for susceptibility testing

No mention

No mention

Not suggested

Treatment

Anti-microbial susceptibility for CLA

Recommended in areas/populations with a known high resistance rate (>20%)

Recommended depending on national/geographic region

Recommended (particularly for CLA)

Use of CLA

Empiric use in low resistance area

Use only with proven susceptibility

Use only with proven susceptibility

Use of MET-AST to guide eradication

Not mentioned

Not mentioned

Not recommended

AST guided triple therapy

Triple therapy (PPI + AMO + CLA/MET); 7–14 days

Treatment based on susceptibility; 14-day duration recommended

Stronger antimicrobial stewardship; CLA only with known susceptibility

Bismuth based quadruple therapy (bismuth, PPI, AMO, MET)

Not mentioned

Recommended as option in resistant cases or unknown susceptibility

Encouraged as empirical therapy when susceptibility unknown

Eradication

Non-invasive test

13C-urea breath test (13C-UBT) Monoclonal stool antigen test

13C-urea breath test (13C-UBT) 2-step monoclonal stool antigen test

13C-urea breath test (13C-UBT) 2-step monoclonal stool antigen test

Minimum period to wait to assess for eradication

4-8 weeks after completion of therapy

4 weeks after completion of therapy

6-8 weeks after completion of therapy

Conclusion

H. pylori infection is common in children, although the majority remain asymptomatic. Current evidence does not support an association between H. pylori and disorder of gut–brain interaction, chronic immune thrombocytopenic purpura, or short stature. For diagnosis invasive testing with esophagogastroduodenoscopy is recommended and eradication therapy is required in presence of PUD and or erosion. To ensure eradication, non-invasive tests such as the urea breathe test or two step monoclonal antigen test should be performed 6-8 weeks after completion of therapy. Follow up endoscopy is recommended in cases of complicated PUD. In view of rising global antibiotic resistance, AST is mandatory before initiating antibiotic therapy. A CLA-AST-guided triple therapy is recommended for 14 days of duration. In settings where AST is unavailable, bismuth-based quadruple therapy (bismuth, PPI, amoxicillin, and metronidazole) should be used empirically as the first-line regimen.

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