Multi-Drug Resistant Candida Auris Infections in Extreme Low Birth Weight Neonates: A Growing Concern

Bijarniya KM and Kalane S

Published on: 2024-09-27

Abstract

Background: Candida auris is a multidrug-resistant fungus that poses a significant threat to extreme low birth weight (ELBW) neonates, who are already vulnerable due to their immature immune systems.

Aim: To study the risk factors, clinical presentation, treatment and outcome of C. auris infections in ELBW neonates.

Methods: A retrospective cohort study of 5 ELBW neonates who developed C. Auris infection in a tertiary care neonatal intensive care unit over 1 years.

Results: The mean birth weight and gestational age was 645±85gms and 27 ± 2 weeks respectively. ELBW neonates are at increased risk of C. auris colonization and infection, which can manifest as sepsis, meningitis, or urinary tract infections. Accurate diagnosis requires advanced laboratory testing, and treatment options are limited due to antifungal resistance.

Conclusion: C. auris infections in ELBW neonates require prompt recognition, effective treatment, and stringent infection control measures to prevent transmission.

Keywords

Candida auris; Extreme low birth weight neonates; Multidrug-resistant fungus; Infection control

Introduction

Candida auris, a highly infectious and drug-resistant fungal pathogen, has emerged as a significant threat to global health, since its first identification in 2009 in Japan [1]. C. auris has caused outbreaks in healthcare facilities worldwide, with high mortality rates and transmission rates [2]. Candida auris infection affects approximately 2-5% of hospitalized patients worldwide [3]. In intensive care units (ICUs), the incidence of C. auris infection can be as high as 10-20% [4]. Neonates classified as Extremely Low Birth Weight (ELBW) were those weighing less than 1000g at birth, are particularly vulnerable to C. auris infections due to their immature immune systems, prolonged hospitalization in Neonatal Intensive Care Units (NICUs), and exposure to invasive medical devices and broad-spectrum antibiotics [5,6]. The increasing incidence of C. auris infections in ELBW neonates poses significant challenges for healthcare providers, as these infections are associated with high mortality rates, prolonged hospital stays, and long-term sequelae [7].

There is scant information on the clinical course and outcome of C. auris infection in high risk neonates. We present a retrospective cohort study of C. auris infection in ELBW neonates a tertiary care neonatal intensive care unit.

Method

Here is a case series of 5 ELBW neonates who developed C. auris infection in a tertiary neonatal intensive care unit over 1 year from September 2023 to August 2024.Figure 1: Growth of candida auris on agar.

C. auris can easily be misidentified in conventional diagnostic laboratories using biochemical typing. In our study, isolates were confirmed as C.auris with application identification methods MALDITOF (VITEK MS). It forms oval or elongated yeast cells, which are single, in pairs, or in groups. Importantly, hyphal or pseudohyphal forms seldom occur [8]. We studied the clinical, demographic profile, susceptibility of the organisms, response to treatment, end organ involvement, survival outcome of C, auris sepsis in ELBWs.

Result

Total number of babies admitted in our NICU during the study period were 952. Amongst these 48 babies were ELBW. Nine babies had Candida sepsis, 2 babies

C.albicans, 1 candida glabrata, 1 candida parasilosis and 5 grew C. auris from blood or urine culture. Characteristics of all 5 cases are shown in Table 1. Mean gestation age and birth weight of these babies were 27 ± 2 weeks and 645 ± 85 gms respectively.

Candida sepsis was diagnosed at a mean postnatal age of 21 ±11 days of life. All babies have central line prior to infection. Two infants (40%) had associated blood culture proven Gram-negative sepsis and were under broad spectrum antibiotic therapy when they developed C. auris infection. The most common sites of Candida auris infection in ELBW neonates were blood (60%) and urine (40%), with some cases involving multiple sites (20%). Notably, 20% of cases involved infection of the central nervous system (CSF), highlighting the potential for severe and disseminated. One infant showed organ involvement in form of fungal ball in both kidneys. Literature on Candida auris sepsis in ELBWs has been shown in Table 1.

Sensitivity Pattern

The in vitro sensitivity testing revealed that Candida auris isolates from ELBW neonates exhibited a high degree of susceptibility to echinocandins, with all isolates sensitive to micafungin, caspofungin, and anidulafungin. This suggests that echinocandins may be an effective treatment option for C. auris infections. 20% cases which were initially sensitive later on next reports showed resistance to amphotericin. As the identification of C. auris and the sensitivity patterns were not available in the beginning of this outbreak, we assumed that all candida infections were similar to C. albicans and hence were treated with fluconazole. After identification of organism as C. auris and knowing the sensitivity to antifungal medications, treatment regimen was changed to amphotericin.

Laboratory Parameters

The mean CRP was 53±84. At the start of treatment, the platelet count ranged from 16,000 to 86,000, with a median of 43,000. 2 babies required RDP transfusion. During recovery, the platelet count increased substantially, ranging from 55,000 to 2,00,000, with a median of 94,000. This data shows that the treatment was effective in improving platelet count, which is a critical indicator of hematological recovery.

Outcome

The outcomes revealed a concerning trend, with four out of five cases resulting in mortality, and only one case achieving discharge. Fungal Sepsis accounting for 50% of deaths. Liver failure and Bronchopulmonary dysplasia each attributing for 1 death. The presence of sepsis as a cause of death in half of the cases highlights the need for vigilant monitoring and aggressive management of infections.

Table 1: Characteristics of ELBW neonates with Candida auris infection.

 

Case 1

Case 2

Case 3

Case 4

Case 5

GA (weeks)

28+4

30+5

24+3

25+5

26 +6

Sex

Male

Male

Male

Female

Female

Birth weight (gms)

700

980

540gms

380gm

625gms

Maternal risk factor

Chorioamniotis

Chorioamniotis

Chorioamniotis

Severe preeclampsia

Chorioamniotis

Antenatal steroid

Incomplete

Incomplete

Incomplete

Complete

Incomplete

Postnatal steroid

Not given

Not given

Not given

Not given

Not given

Underlying condition

RDS/NEC

RDS

RDS

RDS

RDS

Day of illness

29

5 days

12 days

20 days

41 days

Symptoms/sig n

Feed intolerance

Abdominal distension

Apnea

Apnea

Abdominal distension/vomiting

Antibiotics till this culture

Mero, vanco, piptaz

Meropenum, amikacin

Piptaz, meropenum

Piptaz, meropenum

Piptaz, mero, levoflox, colistin

Antibiotics duration till culture

14 days

7 days

6, 6 days

7, 14 days

7, 14 days

Central line duration

80 days

14 days

84 days

40 days

75 days

Ventilator duration

15 days

2 days

70 days

58 days

30 days

Blood culture positive prior candida infection

Klebsiella pneumonae

-

-

-

Burkholderia, cenocepacia

Blood culture positive after candida infection

-

-

Klebsiella pneumonae

Klebsiella pneumona e

-

Site of infection

Blood, urine,

Urine

Blood, urine

Blood

Blood, urine, CSF

Candida auris sensitive to

mica, caspo, anidula

Ampho, caspo, mica, anidula

Ampho, mica, caspo, anidula

Ampho, mica, caspo, anidula

Anidula, mica, caspo, ampho

Antifungal

Flucan,

Flucan,

Flucan,

Flucan,

Flucan,Ampho,

given

ampho, mica

Ampho

ampho-B

ampho B

mica

Antifungal duration

4, 21, 28

4,10 days

7, 14 days

5 days, 14days

7, 14, 19

Number of PCV given

8

2

6

9

7

Number of RDP given

35

-

-

-

12

WBC count

3680

3210

23180

22,200

8400

DLC count N/L/M/E/B

39.4/43.8/14.

42.7/44.2/6.9/

46.7/27.2/21.

64.8/19.2/

42.4/42.4/8.9/

2/2.6/0

5/1.2

2/4.4/0.1

15.6)0.2/0.2

0.4

Platelet count At start During

16000

58,000

86,000

94,000

23,000

recovery

33000

4,97,000

1,58,000

2,00,000

55,000

IT ratio

0.027

0.22

0.077

0.067

0.01

CRP

15.5

21.2

1.7

30.3

199

Urine KOH

Budding yeast

Budding yeast

Budding yeast

-

Budding yeast

CSF

Meningitis

Normal

Normal

Meningitis

Meningitis

USG KUB

Normal

Normal

Normal

Normal

Fungal ball in both kidneys

USG brain

-

PVL grade 3

Normal

Normal

B/L grade 1 hemorrhage

ECHO

PDA

PDA

PDA, PAH

PDA , PAH

Normal

Eye examination

-

Normal

Normal

Normal

Normal

IVH

-

-

-

-

Grade 1

PVL

-

Grade 3

-

-

Grade 1

ROP

-

-

Stage 2, zone3, plus disease in right eye

-

-

NEC

Grade 3

-

-

-

-

BPD

-

-

Severe BPD

Severe BPD

-

Total duration of hospital stay

86 days

38 days

118 days

92 days

102 days

Weight at discharge

1.175kg

1.33kg

1.830kg

625 gm

1.070 kg

Outcome

Death

Discharge

Death

Death

Death

Cause of death

Sepsis

-

BPD

Liver failure

Sepsis

Discussion

  1. auris isolates have been misidentified as other candida species [9-12]. These isolates have been frequently misidentified as Candida haemulonii (a rare cause of infection in humans), Candida famata, Candida sake, and Saccharomyces species.

Phylogenetic analysis reveals C. auris’s close relationship with the C. haemulonii species complex, which has rarely been associated with invasive infections [13]. Some of the reported isolates of C. haemulonii might be C. auris. Various methods have been advocated to reduce these errors in identification [14]. The sensitivity of the organism to micafungin, caspofungin, and resistance to fluconazole was similar to other series. The mutations in the ERG and FKS, efflux pumps, and biofilm formation are potential C. auris mechanisms for resistance [15].

The reports of neonatal C. auris infections are sparse. Up till now only 3 cases of microprimies with C.auris sepsis have been reported [16]. In 2007, there was a report of four cases of multi-drug resistant candida haemulonii in neonates with 50% mortality [17]. This organism might have been C. auris. Subsequently, few reports of C. auris infections have been reported, but the majority are in the adult population. The fact that Candida auris infection is easily acquired from the environment and health-care settings is a great concern for the vulnerable population, who is at high risk in the intensive care units. Fungal infections are mostly caused by endogenous flora but C. auris infections are exogenously acquired. Contamination of the hands and clothes of physicians and nurses leads to the spread of the infection to other ICU patients. C. auris can survive up to 14 days on devices due to biofilm formation and on surfaces for up to a week. Reusable probes (temperature probes) and catheters are identified as potential sources of contamination with C. auris in ICU settings [15,18-20].

The clinical features of C. auris infection in neonates are very similar to infections caused by either bacteria or fungi. In our study, all of these neonates developed late- onset sepsis (onset after the first 72 h of age), indicating that this is a hospital-acquired infection likely due to horizontal transmission. Associated risk factors included prematurity, presence of central lines, assisted respiratory support, and treatment with broad-spectrum antibiotics for bacterial sepsis.

The overall mortality was 50% in this cohort. When C. auris sensitivity was identified, therapy was changed to amphotericin and CDC-recommended infection control guidelines were followed. As a preventive measure, Chandramati planned to use micafungin as a prophylaxis for all neonates <32 weeks for the first 2 weeks after birth or longer. Incidence of C. auris infection showed significant rate drop on 6 months of follow-up data [16]. However, usage of this strategy could lead to an increased risk of resistance to echinocandins [21]. In our center, infection control measures to prevent C. auris transmission included [22] single patient room, contact isolation, proper hand hygiene, appropriate environmental disinfection, meticulous use of antibiotics, early removal of central lines, incubator humidity reduction policy, and developed a treatment protocol to use amphotericin as a drug for candidemia based on our sensitivity pattern.

Conclusion

In conclusion, our study highlights the growing concern of Candida auris infections, which pose a significant threat to ELBW neonates due to their high mortality rate, rapid transmission, and antifungal resistance. This study indicates that C. auris infection is prevalent and replacing other forms of invasive fungal infection in the NICU. The clinical features, sensitivity pattern, management and outcome (morbidity and mortality) of invasive C. auris infection are presented. We feel that treatment with amphotericin and CDC recommended infection control policy together improves the outcome.

Funding

Declaration of Competing Interest

Nil.

Conflict of Interest

None.

References

  1. Satoh K, Makimura K, Hasumi Y, et al. Candida auris sp. Nov., a novel ascomycetous yeast isolated from the external ear canal of a patient in Japan. Microbiol Immunol 2009; 53: 41-44.
  2. Vallabhaneni S, Kallen A, Tsay S, et al. Investigation of a Candida auris outbreak in a US acute care hospital. Clin Infect Dis. 2019; 69: 1924-1931.
  3. Chowdhary A, Voss A, Meis JF. Multidrug-resistant Candida auris: ‘new kid on the block’ in hospital-associated infections?. J Hosp Infect. 2017; 96: 272-281.
  4. Magobo RE, Corcoran C, Seetharam S, et al. Candida auris: an emerging pathogen. Lancet Infect Dis. 2018; 18: e34-e43.
  5. Stoll BJ, Hansen NI, Bell EF, et al. Neonatal nosocomial infections: Epidemiology and prevention. J Perinatol. 2015; 35: 751-756.
  6. Weitkamp JH, Poindexter BB, Lahart CJ, et al. Candida infections in the neonatal intensive care unit. Semin Perinatol. 2017; 41: 451-458.
  7. Kaufman DA, Coggins SA, Zanelli SA, et al. Candida auris: A review of the literature. J Mycol Med. 2017; 27: 139-145.
  8. Jeffery-Smith A, Taori SK, Schelenz S, Jeffery K, Johnson EM, Borman A, et al. Candida auris: a review of the literature. Clin Microbiol Rev. 2017; 31.
  9. Chakrabarti A, Sood P, Rudramurthy SM et al. Incidence, characteristics and outcome of ICU-acquired candidemia in India. Intensive Care Med. 2015; 41: 285-95.
  10. Kathuria S, Singh PK, Sharma C, et al. Multidrug-resistant Candida auris misidentified as Candida haemulonii: Characterization by matrix-assisted laser desorption ionization–time of flight mass spectrometry and DNA sequencing and itsantifungal susceptibility profile variability by Vitek 2, CLSI broth microdilution, and Etest method. J Clin Microbiol. 2015; 53: 1823-1830.
  11. Wattal C, Oberoi JK, Goel N, Raveendran R, Khanna S. Matrix assisted laser desorption ionization time of flight mass spectrometry (MALDITOF MS) for rapid identification of micro-organisms in the routine clinical microbiology laboratory. Eur J Clin Microbiol Infect Dis. 2017; 36: 807-812.
  12. Kim TH, Kweon OJ, Kim HR, Lee MK. Identification of uncommon Candida species using commercial identification system. J Microbiol Biotechnol. 2016; 26: 2206-2213.
  13. Chowdhary A, Sharma C, Meis JF. Candida auris: A rapidly emerging cause of hospital-acquired multidrug-resistant fungal infections globally. PLoS Pathog. 2017; 13: e1006290.
  14. Kumar A, Sachu A, Mohan K, Vinod V, Dinesh K, Karim S. Simple low cost differentiation of Candida auris from Candida haemulonii complex using CHROM agar Candida medium supplemented with Pal’s medium. Rev Iberoam Micol. 2017; 34: 109-111.
  15. Osei Sekyere J. Candida auris: A systematic review and meta-analysis of current updates on an emerging multidrug-resistant pathogen. Microbiol Open. 2018; 7: e578.1-29.
  16. Chandramati J, Sadanandan L, Kumar A, Ponthenkandath S. Neonatal Candida auris infection: management and prevention strategies– a single centre experience. J Paediatr Child Health. 2020; 56: 1565-1569.
  17. Khan ZU, Al-Sweih NA, Ahmad S, et al. Outbreak of Fungemia among neonates caused by Candida haemulonii resistant to amphotericin B, itraconazole, and fluconazole. J Clin Microbiol. 2007; 45: 2025-2027.
  18. Warris A. Candida auris, what do paediatricians need to know?. Arch Dis Child. 2018; 103: 891-894.
  19. Bradley SF. What is known about Candida auris. JAMA. 2019; 322: 1510-1511.
  20. Eyre DW, Sheppard AE, Madder H, et al. ACandida auris outbreak and its control in an intensive care setting. N Engl J Med. 2018; 379: 1322-1331.
  21. Rudramurthy SM, Chakrabarti A, Paul RA, Sood P, Kaur H, Capoor MR, et al. Candida auris candidaemia in Indian ICUs: analysis of risk factors. J Antimicrob Chemother 2017; 72: 1794-801.
  22. ElBaradei A. A decade after the emergence of Candida auris: what do we know?. Eur J Clin Microbiol Infect Dis. 2020; 39: 1617-1627.